Get them back there,,,if something is leaking, then yes ,something was missed.
They need to remove all the siding in the problem area and look for papered areas that overlap inside out (tuck your raincoat into your pants and tape it is the new technique), or where the weather barrier (tyvek)may be cut.
Sometimes the water comes in from way above a leak, look at other flashed areas also.
www.jlconline.com can give you proper advice on areas to watch for...and teach you plenty about what should be where.